Developed software

We develop software tools that focus mainly on analysing the 3D structure of proteins, ligands, protein fragments, and whole protein families. Our software can be divided into the following areas:

• Visualisation of proteins: Mol*, Mol*VS, LiteMol, 2DProts, OverProt, 2DProts

• Annotation of proteins: SecStrAnnotator

• Validation of protein structure: ValidatorDB, MotiveValidator, ValTrendsDB

• Detection of protein channels and fragments: MOLE, MoleOnline, ChannelsDB, PatternQuery, ChannelsDB 2.0

• Calculation of partial atomic charges: αCharges, Atomic Charge Calculator II

• Other software: bio.tools sum

Our software's source code is available on our research group's official GitHub website.